PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn237771
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Nin-like
Protein Properties Length: 402aa    MW: 44447.8 Da    PI: 8.3127
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn237771genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK25.82.1e-083053272648
      RWP-RK  26 gvclTvLKriCRqyGIkRWPhRk 48 
                 +v+ +++K iCRq+GI  WP+ k
  Achn237771 305 QVGRSTMKHICRQHGILWWPSHK 327
                 59******************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF020426.2E-7306329IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MIICMVVTGT WLGAQGVIKC SNRENGESET ELRVICVVNL RPAMTDQIFG SYALLPLQLV  60
TASYVPSNGL NFTEQNTAPF LVSDGDVVGS SNSSEDDVMF QLPNIQVGFS MDSADGYDSF  120
SHKRISDIEN HVIPSSHVKK LNEKMLKALS LLKESSEGGI FAQVWVPIKH GDRYILCTCE  180
QPYLLDQNHQ MLVPYREAVN LRTTAPPTLH PQCLSKNKRA ALGEIADVLR AVCHAHRLPL  240
PLAWIPCSTI HIVDGVTRKV FVREVSKTSN EKCTLFIEET TSYVNDQEMH GFVHACTHHY  300
LNEGQVGRST MKHICRQHGI LWWPSHKRSK SKRLPYKSKD VNGSTKAVHE PVNQASLATG  360
PLSAGGSPSR PAGLKCTDKH TQQEMSRDRG LSLSKQHIGK T*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326332KRSKSKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012478385.11e-38PREDICTED: protein NLP8
RefseqXP_012478387.11e-38PREDICTED: protein NLP8
TrEMBLA0A0D2RK532e-38A0A0D2RK53_G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.22e-29Nin-like family protein